Temporal dynamic of the phylogenetic diversity of the bird community of agricultural lands in Ukrainian steppe drylands


Keywords: diversity; Faith’s index; Rao’s quadratic entropy; overdispersion; stability; global climate changes; agroecology.

Abstract

This study discussed the importance of the phylogenetic components in the structure of bird communities of anthropogenically transformed ecosystems. The investigation was conducted in the landscapes of the south and south-east of Ukraine in the nesting seasons 1988–2018. The bird community in the agricultural landscape was found to be presented by 10 species. The number of species was closely correlated with its phylogenetic analogue – Faith’s index. Both indices were stationary over time, as they do not show a statistically significant time trend. The two axes were extracted as a result of the DPCOA procedure and the permutation test showed their statistical significance. The axis 1 was the most sensitive to the opposite dynamics of the abundance of Coturnix coturnix and Burhinus oedicnemus on the one hand and Alauda arvensis and Melanocorypha calandra on the other. The axis 2 is the most sensitive to the opposite dynamics of Corvus monedula and Melanocorypha calandra on the one hand and Coturnix coturnix and Motacilla flava on the other. Based on phylogenetic diversity, the years can be clustered with the extraction of four relatively homogeneous phylogenetic structures of bird communities. The indicator of the initial period of dynamics (1988–1992) was Burhinus oedicnemus. Sowing or mechanical weeding may be considered as a major factor of nest destruction of Burhinus oedicnemus. The decreasing of the abundance of the trophic recourses because of agricultural activity may have caused the monotonous negative trend over time of the Burhinus oedicnemus populations. The period 1993–2003 was a transitional one, for which there were no clear indicators, as a characteristic feature of this period was the processes of bird community restructuring. The period 2004–2013 was characterized by the loss of Burhinus oedicnemus from the community and a sharp increase in the abundance of Corvus monedula. These species are distinguished by their phylogenetic specificity and are located on the periphery relative to the phylogenetic core of the community. There was growing importance in the community of such species as Alauda arvensis, Anthus campestris, and Melanocorypha calandra between 2014 and 2018. Our results also confirm the assumption that phylogenetic overdispersion is an important requirement for the stability of the bird community in anthropogenically transformed landscapes.

References

Amat, J. A. (1986). Information on the diet of the stone curlew Burhinus oedicnemusin Doñana, Southern Spain. Bird Study, 33, 71–73.


Andrushenko, A. Y., & Zhukov, A. V. (2016). Scale-dependent effects in structure of the wintering ecological niche of the mute swan during wintering in the gulf of Sivash. Biological Bulletin of Bogdan Chmelnitskiy Melitopol State Pedagogical University, 6(3), 234–247.


Arroyo-Rodriguez, V., Cavender-Bares, J., Escobar, F., Melo, F., Tabarelli, M. & Santos, B. (2012). Maintenance of tree phylogenetic diversity in a highly fragmented rain forest. Journal of Ecology, 100, 702–711.


Bae, S., Müller, J., Lee, D., Vierling, K. T., Vogeler, J. C., Vierling, L. A., Hudak, A. T., Latifi, & Thorn, H. S. (2018). Taxonomic, functional, and phylogenetic diversity of bird assemblages are oppositely associated to productivity and heterogeneity in temperate forests. Remote Sensing of Environment, 215, 145–156.


Bässler, C., Müller, J., Cadotte, M., Heibl, C., Bradtka, J., Thorn, S., & Halbwachs, H. (2016). Functional response of lignicolous fungal guilds to bark beetle deforestation. Ecological Indicators, 65, 149–160.


Bell, G. (2001). Neutral macroecology. Science, 293, 2413–2418.


Blinkova, O., & Shupova, T. (2017). Bird communities and vegetation composition in the urban forest eco-system: Correlations and comparisons of diversity indices. Ekológia (Bratislava), 36(4), 366–387.


Cadotte, M. W., Dinnage, R., & Tilman, D. (2012). Phylogenetic diversity promotes ecosystem stability. Ecology, 93, 223–233.


Cavender-Bares, J., Ackerly, D., Baum, D., & Bazzaz, F. (2004). Phylogenetic overdispersion in Floridian oak communities. American Naturalist, 163, 823–843.


Cavender-Bares, J., Keen, A., & Miles, B. (2006). Phylogenetic structure of Floridian plant communities depends on taxonomic and spatial scale. Ecology, 87, S109–S122.


Cavender-Bares, J., Kozak, K., Fine, P., & Kembel, S. (2009). The merging of community ecology and phylogenetic biology. Ecological Letters, 12(7), 693–715.


Chaplygina, A. B., Pakhomov, O. Y., & Brygadyrenko, V. V. (2019). Trophic links of the song thrush (Turdus philomelos) in transformed forest ecosystems of North-Eastern Ukraine. Biosystems Diversity, 27(1), 51–55.


Chaplygina, A. B., Savynska, N. O., & Brygadyrenko, V. V. (2018). Trophic lincs of the spotted flycatcher, Muscicapa striata, in transformed forest ecosystems of North-Eastern Ukraine. Baltic Forestry, 24(2), 304–312.


Chun, J., & Lee, C. (2018). Partitioning the regional and local drivers of phylogenetic and functional diversity along temperate elevational gradients on an East Asian peninsula. Scientific Reports, 8, 2853.


Dehling, D., Fritz, S., Töpfer, T., Päckert, M., Estler, P., Böhning-Gaese, K., & Schleuning, M. (2014). Functional and phylogenetic diversity and assemblage structure of frugivorous birds along an elevational gradient in the tropical Andes. Ecography, 37, 1047–1055.


Donald, P. F., Green, R. E., & Heath, M. F. (2001). Agricultural intensification and the collapse of Europe’s farmland bird populations. Proceedings of the Royal Society B, Biological Sciences, 155(1462), 39–43.


Dranga, A. O., Gorlov, P. I., Matsyura, A. V., & Budgey, R. (2016). Breeding biology of rook (Corvus frugilegus) in the human transformed steppe ecosystems (the case of Botievo Wind Farm). Biological Bulletin of Bogdan Chmelnitskiy Melitopol State Pedagogical University, 6(1), 41–62.


Dray, S., & Dufour, A. (2007). The ade4 package: Implementing the duality diagram for ecologists. Journal of Statistical Software, 22(4), 1–20.


Dross, C., Jiguet, F., & Tichit, M. (2017). Concave trade-off curves between crop production and taxonomic, functional and phylogenetic diversity of birds. Ecological Indicators, 79, 83–90.


Faith, D. P. (2002). Quantifying biodiversity: A phylogenetic perspective. Conservation Biology, 16(1), 248–252.


Faith, D. P. (2008). Threatened species and the potential loss of phylogenetic diversity: Conservation scenarios based on estimated extinction probabilities and phylogenetic risk analysis. Conservation Biology, 22(6), 1461–1470.


Flynn, D., Gogol-Prokurat, M., Nogeire, T., Molinari, N., Richers, B., Lin, B., Simpson, N., Mayfield, M., & DeClerck, F. (2009). Loss of functional diversity under land use intensification across multiple taxa. Ecology Letters, 12, 22–33.


Frishkoff, L., Karp, D., M’Gonigle, L., Mendenhall, C., Zook, J., Kremen, C., Hadly, E., & Daily, G. (2014). Loss of avian phylogenetic diversity in neotropical agricultural systems. Science, 345(6202), 1343–1346.


Gaget, E., Fay, R., Augiron, S., Villers, A., & Bretagnolle, V. (2019). Long-term decline despite conservation efforts questions Eurasian Stone-curlew population viability in intensive farmlands. Ibis, 161, 359–371.


Geiger, F., Bengtsson, J., Berendse, F., Weisser, W., Emmerson, M., Morales, M., Ceryngier, P., Liira, J., Tscharntke, T., Winqvist, C., Eggers, S., Bommarco, R., Pärt, T. Bretagnolle, V., Plantagenest, M., Clement, L., Dennis, C., Palmer, C., Oñate, J., Guerrero, I., Hawro, V., Aavik, T., Thies, C., Flohre, A., Hänke, S., Fischer, C., Goedhart, P., & Inchausti, P. (2010). Persistent negative effects of pesticides on biodiversity and biological control potential on European farmland. Basic and Applied Ecology, 11(2), 97–105.


Gerisch, M., Agostinelli, V., Henle, K., & Dziock, F. (2012). More species, but all do the same: Contrasting effects offlood disturbance on ground beetle functional and species diversity. Oikos, 121, 508–515.


Gilbert, G. S., & Webb, C. O. (2007). Phylogenetic signal in plant pathogen – host range. Proceedings of the National Academy of Sciences, United States of America, 104, 4979–4983.


Gilburn, A. S., Bunnefeld, N., Wilson, J. M., Botham, M. S., Brereton, T. M., Fox, R., & Goulson, D. (2015). Are neocotinoid insecticides driving declines of widespread butterflies? PeerJ, 3, e1402.


Gomez, J. P., Bravo, G. A., Brumfield, R. T., Tello, J. G. & Cadena, C. D. (2010). A phylogenetic approach to disentangling the role of competition and habitat filtering in community assembly of Neotropical forest birds. Journal of Animal Ecology, 79, 1181–1192.


Gorlov, P. I., Siokhin, V. D., & Matsyura, A. V. (2016). Assessment of potential threats of wind farms for migratory birds in the south of Ukraine. Biological Bulletin of Bogdan Chmelnitskiy Melitopol State Pedagogical University, 6(3), 175–186.


Green, R. E., Tyler, G. A., & Bowden, C. G. (2000). Habitat selection, ranging behavior and diet of the stone curlew (Burhinus oedicnemus) in Southern England. Journal of Zoology, 250(2), 161–183.


Hallmann, C. A., Foppen, R. P., van Turnhout, C. A., de Kroon, H. P., & Jongejans, E. R. (2014). Declines in insectivorous birds are associated with high neonicotinoid concentrations. Nature, 511, 341–343.


Hardy, O. J. (2008). Testing the spatial phylogenetic structure of local communities: Statistical performances of different null models and test statistics on a locally neutral community. Journal of Ecology, 96, 914–926.


Havrda, M., & Charvat, F. (1967). Quantification method of classification processes: Concept of structurala – entropy. Kybernetik, 3, 30–35.


Helmus, M., Savage, K., Diebel, M., Maxted, J., & Ives, A. (2007). Separating the determinants of phylogenetic community structure. Ecology Letters, 10, 917–925.


Hubbell, S. P. (2001). The unified neutral theory of biodiversity and biogeography. Princeton University Press, Princeton, New Jersey.


Hulbert, A. H. (2004). Species-energy relationships and habitat complexity in bird communities. Ecology Letters, 7, 714–720.


Jetz, W., Thomas, G., Joy, J. B., Redding, D., Hartmann, K., & Mooers, A. (2014). Global distribution and conservation of evolutionary distinctness in birds. Conservation Biology, 24(9), 919–930.


Johnson, M. D. (2007). Measuring habitat quality: A review. Condor, 109, 489–504.


Koshelev, V. A. (2017). Ornithocomplexes reeds: The structure, dynamics, problems of protection. Biology and Valeology, 19, 16–27.


Kraft, N. J., Godoy, O. Y., & Levine, J. M. (2015). Plant functional traits and the multidimensional nature of species coexistence. Proceedings of the National Academy of Sciences United States of America, 112, 797–802.


Kunah, O. M., & Papka, O. S. (2016a). Geomorphological ecogeographical variables definig features of ecological niche of common milkweed (Asclepias syriaca L.). Biological Bulletin of Bogdan Chmelnitskiy Melitopol State Pedagogical University, 1, 243–275.


Kunah, O. M., & Papka, O. S. (2016b). Ecogeographical determinants of the ecological niche of the common milkweed (Asclepias syriaca) on the basis of indices of remote sensing of land images. Visnyk of Dnipropetrovsk University, Biology, Ecology, 24(1), 78–86.


Kunah, O. M., Pakhomov, O. Y., Zymaroieva, А. А., Demchuk, N. I., Skupskyi, R. M., Bezuhla, L. S., & Vladyka, Y. P. (2018). Agroeconomic and agroecological aspects of spatial variation of rye (Secale cereale) yields within Polesia and the Forest-Steppe zone of Ukraine: The usage of geographically weighted principal components analysis. Biosystems Diversity, 26(4), 276–285.


Lord, J., Westoby, M., & Leishman, M. (1995). Seed size and phylogeny in 6 temperate floras – constraints, niche conservatism, and adaptation. American Naturalist, 146, 349–364.


MacArthur, R., & Levins, R. (1967). The limiting similarity, convergence, and divergence of coexisting species. American Naturalist, 101, 377–385.


Mayr, E. (1963). Animal species and evolution. Belknap, Cambridge.


Mazel, F., Pennell, M., Cadotte, M., Diaz, S., Riva, G., Grenyer, R., Leprieur, F., Mooers, A., Mouillot, D., Tucker, C., & Pearse, W. (2018). Prioritizing phylogenetic diversity captures functional diversity unreliably. Nature Communication, 9, 2888.


Miklos, I., & Podani, J. (2004). Randomization of presence-absence matrices: Comments and new algorithms. Ecology, 85(1), 86–92.


Mineau, P., & Whiteside, M. (2013). Pesticide acute toxicity is a better correlate of U.S. grassland bird declines than agricultural intensification. PLoS One, 8(2), e57457.


Morelli, F., Benedetti, Y., Ibáñez-álamo, J., Jokimäki, J., Mänd, R., Tryjanowski, P., & Møller, A. (2016). Evidence of evolutionary homogenization of bird communities in urban environments across Europe. Global Ecology and Biogeography, 25(11), 1284–1293.


Morelli, F., Jiguet, F., Sabatier, R., Dross, C., Princé, K., Tryjanowski, P., & Tichit, M. (2017). Spatial covariance between ecosystem services and biodiversity pattern at a national scale (France). Ecological Indicators, 82, 574–586.


Owen, N., Gumbs, R., Gray, C., & Faith, D. (2019). Global conservation of phylogenetic diversity captures more than just functional diversity. Nature Communication, 10, 859.


Pavoine, S., Dufour, A.-B., & Chessel, D. (2004). From dissimilarities among species to dissimilarities among communities: A double principal coordinate analysis. Journal of Theoretical Biology, 228, 523–537.


Pavoine, S., Love, M., & Bonsall, M. (2009). Hierarchical partitioning of evolutionary and ecological patterns in the organization of phylogenetically–structured species assemblages: Application to rockfish (genus: Sebastes) in the Southern California Bight. Ecology Letters, 12, 898–908.


Petchey, O. L., & Gaston, K. J. (2006). Functional diversity: Back to basics and looking forward. Ecology Letters, 9(6), 741–758.


Purvis, A., Agapow, P.-M., Gittleman, J., & Mace, G. M. (2000). Nonrandom extinction and the loss of evolutionary history. Science, 288, 328–330.


R Core Team (2019). R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna.


Redding, D., Mazel, F., & Mooers, A. (2014). Measuring evolutionary isolation for conservation. PLoS One, 9(12), e113490.


Ricklefs, R. E. (1987). Community diversity: Relative roles of local and regional processes. Science, 235, 167–171.


Ricklefs, R., & Schluter, D. (1993). Species diversity: Regional and historical influences. In: Ricklefs, R. E., & Schluter, D. (Eds.). Species diversity in ecological communities. University of Chicago Press, Chicago. Pp. 350–363.


Shannon, C. (1948). A mathematical theory of communication. Bell System Technology Journal, 27, 379–423.


Si, X., Baselga, A., Leprieur, F., Song, X., & Ding, P. (2016). Selective extinction drives taxonomic and functional alpha and beta diversities in island bird assemblages. Journal of Animal Ecology, 85, 409–418.


Si, X., Cadotte, M., Zeng, D., Baselga, A., Zhao, Y., Li, J., Wu, Y., Wang, S., & Ding, P. (2017). Functional and phylogenetic structure of island bird communities. Journal of Animal Ecology, 86, 532–542.


Sobral, F. L., & Cianciaruso, M. V. (2016). Functional and phylogenetic structure of forest and savanna bird assemblages across spatial scales. Ecography, 39, 533–541.


Sokolov, S. G., & Zhukov, A. V. (2016). The diversity of parasites in the chinese sleeper Perccottus glenii Dybowski, 1877 (Actinopterygii: Perciformes) under the conditions of large-scale range expansion. Biology Bulletin, 43(4), 374–383.


Sokolov, S. G., & Zhukov, A. V. (2017). Functional diversity of a parasite assemblages of the chinese sleeper Perccottus glenii Dybowski, 1877 (Actinopterygii: Odontobutidae) and habitat structure of the host. Biology Bulletin, 44(3), 331–336.


Srivastava, D. S., Cadotte, M. W., MacDonald, A. A., Marushia, R. G., & Mirotchnick, N. P. (2012). Phylogenetic diversity and the functioning of ecosystems. Ecology Letters, 15, 637–648.


Terzopoulou, S., Rigal, F., Whittaker, R., Borges, P., & Triantis, K. (2015). Drivers of extinction: The case of Azorean beetles. Biology Letters, 11, 20150273.


Thuiller, W., Lavergne, S., Roquet, C., Boulangeat, I., Lafourcade, B., & Araújo, M. (2011). Consequences of climate change on the tree of life in Europe. Nature, 470, 531–534.


Tilman, D. (1982). Resource competition and community structure. Princeton University Press, Princeton.


Vane-Wright, R. I., Humphries, C. J., & Williams, P. H. (1991). What to protect? – Systematics and the agony of choice. Biological Conservation, 55(3), 235–254.


Venail, P., Gross, K., Oakley, T., Narwani, A., Allan, E., Flombaum, P., Isbell, F., Joshi, J., Reich, P., Tilman, D., van, Ruijven, J., & Cardinale, B. (2015). Species richness, but not phylogenetic diversity, influences community biomass production and temporal stability in a re-examination of 16 grassland biodiversity studies. Functional Ecology, 29, 615–626.


Wang, Y., Cadotte, M., Chen, Y., Fraser, L., Zhang, Y., Huang, F., Luo, S., Shi, N., & Loreau, M. (2019). Global evidence of positive biodiversity effects on spatial ecosystem stability in natural grasslands. Nature Communication, 10, 3207.


Webb, C. O., Ackerly, D. D., McPeek, M. A., & Donoghue, M. J. (2002). Phylogenies and community ecology. Annual Review of Ecology, Evolution and Systematics, 33, 475–505.


Weiher, E., & Keddy, P. (1999). Ecological assembly rules: Perspectives, advances, retreats. Cambridge University Press, Cambridge.


Winter, M., Devictor, V., & Schweiger, O. (2013). Phylogenetic diversity and nature conservation: Where are we? Trends in Ecology and Evolution, 28(4), 199–204.


Zhukov, A. V., Sirovatko, V. O., & Ponomarenko, N. O. (2017). Spatial dynamic of the agriculture fields towards their shape and size. Ukrainian Journal of Ecology, 7(3), 14–31.


Zimaroeva, A., Zhukov, A., & Ponomarenko, A. (2015). Determining spatial parameters of the ecological niche of Parus major (Passeriformes, Paridae) on the base of remote sensing data. Vestnik Zoologii, 49(2), 451–456.


Zupan, L., Cabeza, M., Maiorano, L., Roquet, C., Devictor, V., Lavergne, S., Mouillot, D., Mouquet, N., Renaud, J., & Thuiller, W. (2014). Spatial mismatch of phylogenetic diversity across three vertebrate groups and protected areas in Europe. Diversity and Distribution, 20(6), 674–685.


Zymaroieva, A., Zhukov, O., Fedonyuk, T., & Pinkin, A. (2019b). Application of geographically weighted principal components analysis based on soybean yield spatial variation for agro-ecological zoning of the territory. Agronomy Research, 17(6), 2460–2473.


Zymaroieva, A., Zhukov, O., Romanchuck, L., & Pinkin, A. (2019a). Spatiotemporal dynamics of cereals grains and grain legumes yield in Ukraine. Bulgarian Journal of Agricultural Science, 25(6), 1107–1113.

Published
2020-02-23
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